GALNT3

Across TCGA patient cohorts, GALNT3 protein abundance is significantly associated with the RNA expression of many other genes, with 14,750 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GALNT3-associated genes across cancer lineages are TSPAN13, GALNT12, and GOLPH3L. Each is linked with GALNT3 in more than 4 cancer types. Because this analysis shows association rather than direction, both GALNT3-to-partner and partner-to-GALNT3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GALNT3 versus TSPAN13 in COAD, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT3→partner) and Y-score (partner→GALNT3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	TSPAN13 →	+1.043	+0.554	<.001	<.001	3	5
HNSC	GALNT12 →	+0.903	+0.358	.001	.006	3	5
LSCC	GOLPH3L →	+0.720	+0.489	<.001	<.001	3	5
BRCA	STYK1 →	+0.590	+0.518	.001	<.001	3	5
UCEC	PDLIM7 →	-0.741	-0.603	.002	.003	3	5
OV	ARHGEF6 →	-0.897	-0.594	<.001	.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,750 associations by consensus.

GALNT3 vs TSPAN13 — COAD

Explore this scatter interactively →