GALNT3

Across TCGA patient cohorts, GALNT3 mutation is significantly associated with the RNA expression of many other genes, with 3,007 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GALNT3-associated genes across cancer lineages are RN7SL134P, ARHGAP11A, and PRC1. Each is linked with GALNT3 in more than 2 cancer types. Because this analysis shows association rather than direction, both GALNT3-to-partner and partner-to-GALNT3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL134P grouped by GALNT3-low versus GALNT3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT3→partner) and Y-score (partner→GALNT3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RN7SL134P →	+0.084	+1.763	.002	.007	3	3
UCEC	ARHGAP11A →	+0.611	+1.847	<.001	<.001	3	3
UCEC	PRC1 →	+0.694	+2.115	<.001	<.001	3	3
UCEC	RNA5SP369 →	+0.247	+1.608	.002	.008	3	3
UCEC	RNU6-218P →	+0.381	+1.801	<.001	<.001	3	3
UCEC	SAP30 →	+0.560	+2.436	<.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,007 associations by consensus.

RN7SL134P by GALNT3 expression — UCEC

Explore this box plot interactively →