GALNT2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GALNT2 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,645 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible GALNT2-associated proteins across cancer lineages are P3H1, ITGA5, and PLOD2. Each is linked with GALNT2 in more than 5 cancer types. Because this analysis shows association rather than direction, both GALNT2-to-partner and partner-to-GALNT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GALNT2 versus P3H1 in GBM, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT2→partner) and Y-score (partner→GALNT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMP3H1 →+0.618+0.474.001.00136
PDACITGA5 →+0.453+0.258<.001<.00136
CCRCCPLOD2 →+1.019+0.658<.001<.00135
LSCCEIF5A2 →+0.632+0.539<.001.00135
LSCCFKBP10 →+0.513+0.486<.001<.00135
GBMMMP14 →+0.533+0.415<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,645 associations by consensus.

GALNT2 vs P3H1 — GBM

Per-sample scatter of GALNT2 vs P3H1 in GBM (Pearson r = 0.34).

Explore this scatter interactively →

Exploration