GALNT18

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, GALNT18 mass-spec protein differs between tumor and matched normal tissue in 3 of 18 cancer types tested, making tumor–normal expression one of GALNT18’s most consistent transcriptional readouts.

The strongest signal is observed in lung adenocarcinoma (LUAD), where GALNT18 mass-spec protein is repressed in tumor relative to normal tissue. In most cancer types GALNT18 is over-expressed in tumor, although a few such as LUAD and LSCC show the opposite, repressed pattern.

LUAD, LSCC, and HNSC are the cancer types where GALNT18 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in GALNT18 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUADFemaleAll−0.624<.0018view →
LSCCMaleII,III,IV−0.440<.0014view →
HNSCMaleIII,IV+0.328.0271view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 3 strongest of 3 lineages.

GALNT18–LUAD

Tumor-vs-normal mass-spec protein box plot for GALNT18 in LUAD.

Open the LUAD breakdown →

Exploration