Across TCGA patient cohorts, GALNT17 mutation is significantly associated with the RNA expression of many other genes, with 5,200 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GALNT17-associated genes across cancer lineages are CDT1, OIP5, and KIF20A. Each is linked with GALNT17 in more than 5 cancer types. Because this analysis shows association rather than direction, both GALNT17-to-partner and partner-to-GALNT17 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT17→partner) and Y-score (partner→GALNT17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	CDT1 →	+1.016	+2.718	<.001	.003	3	6
LUAD	OIP5 →	+0.848	+3.735	<.001	<.001	3	5
LUAD	KIF20A →	+0.842	+2.450	<.001	.001	2	6
LUAD	SKP2 →	+0.721	+2.426	<.001	.002	3	5
UCEC	CHAF1B →	+0.587	+2.146	<.001	<.001	3	5
LUAD	CDC7 →	+0.762	+3.477	<.001	.002	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,200 associations by consensus.

Exploration

GALNT17 survival (RNA) · tumor vs normal (RNA) · all GALNT17 data types