GALNT17

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GALNT17 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,562 significant associations in total. BONE shows the largest number of these associations.

The most reproducible GALNT17-associated GO terms across cancer lineages are Positive regulation of sodium ion transmembrane transport, Regulation of sodium ion transmembrane transport, and Regulation of actin filament depolymerization. Each is linked with GALNT17 in more than 5 cancer types. Because this analysis shows association rather than direction, both GALNT17-to-partner and partner-to-GALNT17 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT17→partner) and Y-score (partner→GALNT17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEPositive regulation of sodium ion transmembrane transport →-0.206-2.443<.001<.00136
BONERegulation of sodium ion transmembrane transport →-0.144-2.098.001.00226
BONERegulation of actin filament depolymerization →-0.121-1.921<.001.00135
BONEEmbryonic eye morphogenesis →-0.144-2.215.001.00735
BONEResponse to calcium ion →-0.113-3.142<.001<.00135
SOFT_TISSUEPositive regulation of monoatomic ion transport →-0.080-1.432.005.00635
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,562 associations by consensus.

Exploration