GALE

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GALE RNA expression is significantly associated with the protein abundance of many other proteins, with 10,912 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GALE-associated proteins across cancer lineages are JPT2, NUDC, and EPS8L2. Each is linked with GALE in more than 6 cancer types. Because this analysis shows association rather than direction, both GALE-to-partner and partner-to-GALE results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GALE versus JPT2 in UCEC, with a Pearson correlation of 0.33.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GALE→partner) and Y-score (partner→GALE) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECJPT2 →+0.347+0.977<.001<.00137
COADNUDC →+0.421+0.562<.001<.00137
HNSCEPS8L2 →+0.481+0.865<.001<.00135
PDACESPN →+0.964+0.587<.001.00135
LSCCKIAA1522 →+0.414+0.801<.001<.00135
BRCALYPLA2 →+0.296+0.576<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,912 associations by consensus.

GALE vs JPT2 — UCEC

Per-sample scatter of GALE vs JPT2 in UCEC (Pearson r = 0.33).

Explore this scatter interactively →

Exploration