GALE

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GALE RNA expression is significantly associated with the go_rna of many other GO terms, with 4,090 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GALE-associated GO terms across cancer lineages are Renal vesicle formation, Metanephric renal vesicle formation, and Positive regulation of exosomal secretion. Each is linked with GALE in more than 8 cancer types. Because this analysis shows association rather than direction, both GALE-to-partner and partner-to-GALE results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Renal vesicle formation grouped by GALE-low versus GALE-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GALE→partner) and Y-score (partner→GALE) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHRenal vesicle formation →-1.132-0.911.002.00539
STOMACHMetanephric renal vesicle formation →-1.132-0.911.002.00539
LUNG_NSCLC_LUSCPositive regulation of exosomal secretion →+0.119+1.587<.001.00139
LIVERBradykinin catabolic process →+0.224+0.862.001.00139
BLOOD_LeukemiaPositive regulation of intrinsic apoptotic signaling pathway in response to DNA damage →-0.064-0.615<.001<.00139
LUNG_SCLCGDP-mannose biosynthetic process →+0.138+1.210<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,090 associations by consensus.

Renal vesicle formation by GALE expression — STOMACH

Box plot of Renal vesicle formation in GALE-low vs GALE-high samples in STOMACH.

Explore this box plot interactively →

Exploration