Across TCGA cell cohorts, GAGE12D RNA expression is significantly associated with the mutation status of many other genes, with 109 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible GAGE12D-associated genes across cancer lineages are GPR161, LRIT1, and CASS4. Each is linked with GAGE12D in more than 1 cancer types. Because this analysis shows association rather than direction, both GAGE12D-to-partner and partner-to-GAGE12D results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GAGE12D→partner) and Y-score (partner→GAGE12D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUAD	GPR161 →	+5.228	+3.483	.005	<.001	3	2
OVARY	LRIT1 →	+4.807	+0.330	.003	<.001	3	2
OVARY	CASS4 →	+5.807	+0.440	.001	<.001	3	2
CNS	CCDC141 →	+4.035	+0.508	.006	<.001	3	2
BLOOD_Myeloma	CHRNA4 →	+3.906	+2.469	.009	.001	3	1
SKIN	C2CD3 →	+2.655	+1.134	.001	.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 109 associations by consensus.

Exploration

GAGE12D survival (RNA) · tumor vs normal (RNA) · all GAGE12D data types