GAGE10

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GAGE10 mutation is significantly associated with the RNA expression of many other genes, with 33 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GAGE10-associated genes across cancer lineages are LINC02220, NUTF2P8, and MIR6133. Each is linked with GAGE10 in more than 1 cancer types. Because this analysis shows association rather than direction, both GAGE10-to-partner and partner-to-GAGE10 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GAGE10→partner) and Y-score (partner→GAGE10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMLINC02220 →+0.604+4.730<.001.00331
UCECNUTF2P8 →+0.305+4.982<.001.00931
UCECMIR6133 →+0.953+4.982<.001.00931
UCECMIR8058 →+0.856+5.081<.001.00831
LUSCRNA5SP234 →+0.455+7.924<.001.00831
LUSCRNA5SP31 →+0.705+7.924<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 33 associations by consensus.

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