GABRA2

Across TCGA patient cohorts, GABRA2 protein abundance is significantly associated with the RNA expression of many other genes, with 3,284 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GABRA2-associated genes across cancer lineages are PRODH, SOX10, and SEPTIN3. Each is linked with GABRA2 in more than 1 cancer types. Because this analysis shows association rather than direction, both GABRA2-to-partner and partner-to-GABRA2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GABRA2 versus PRODH in GBM, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GABRA2→partner) and Y-score (partner→GABRA2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	PRODH →	+0.812	+0.585	<.001	<.001	3	1
GBM	SOX10 →	+0.927	+0.361	.006	.004	3	1
GBM	SEPTIN3 →	+1.426	+0.821	<.001	<.001	3	1
GBM	CYP2D6 →	+0.449	+0.431	<.001	<.001	3	1
GBM	RASL10A →	+0.668	+0.491	<.001	<.001	3	1
GBM	NEFH →	+1.127	+0.549	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,284 associations by consensus.

GABRA2 vs PRODH — GBM

Explore this scatter interactively →