GABBR2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GABBR2 mutation is significantly associated with the total protein of many other genes, with 57 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GABBR2-associated genes across cancer lineages are MYH11, GAPDH, and Cyclin-B1. Each is linked with GABBR2 in more than 4 cancer types. Because this analysis shows association rather than direction, both GABBR2-to-partner and partner-to-GABBR2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MYH11 grouped by GABBR2-low versus GABBR2-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GABBR2→partner) and Y-score (partner→GABBR2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCMYH11 →-1.181-3.160.011.01934
COADGAPDH →+0.516+1.593.009.04325
UCECCyclin-B1 →+0.519+1.777.003.00233
UCEC4E-BP1_pT37_T46 →-0.305-1.289.010.02333
COADMre11 →+0.092+2.334.048.01833
LUSCBeclin →+0.293+3.000<.001.03523
Each partner links to its Q-omics profile. Showing the 6 strongest of 57 associations by consensus.

MYH11 by GABBR2 expression — LUSC

Box plot of MYH11 in GABBR2-low vs GABBR2-high samples in LUSC.

Explore this box plot interactively →

Exploration