GABARAP

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GABARAP RNA expression is significantly associated with the go_rna of many other GO terms, with 3,508 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible GABARAP-associated GO terms across cancer lineages are Polyamine acetylation, Spermidine acetylation, and Eosinophil activation involved in immune response. Each is linked with GABARAP in more than 14 cancer types. Because this analysis shows association rather than direction, both GABARAP-to-partner and partner-to-GABARAP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Polyamine acetylation grouped by GABARAP-low versus GABARAP-high in BLOOD_Lymphoma.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GABARAP→partner) and Y-score (partner→GABARAP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaPolyamine acetylation →+0.211+0.816<.001<.001315
BLOOD_LymphomaSpermidine acetylation →+0.211+0.816<.001<.001315
LUNG_NSCLC_LUSCEosinophil activation involved in immune response →+0.247+1.124<.001<.001312
LUNG_NSCLC_LUSCEosinophil activation →+0.247+1.124<.001<.001312
LUNG_NSCLC_LUSCEosinophil degranulation →+0.247+1.124<.001<.001312
BONEscaRNA localization to Cajal body →-0.105-0.711.005.007312
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,508 associations by consensus.

Polyamine acetylation by GABARAP expression — BLOOD_Lymphoma

Box plot of Polyamine acetylation in GABARAP-low vs GABARAP-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration