FYCO1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FYCO1 mutation is significantly associated with the total protein of many other genes, with 59 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FYCO1-associated genes across cancer lineages are ATM, ASNS, and eEF2. Each is linked with FYCO1 in more than 3 cancer types. Because this analysis shows association rather than direction, both FYCO1-to-partner and partner-to-FYCO1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by FYCO1-low versus FYCO1-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FYCO1→partner) and Y-score (partner→FYCO1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADATM →-0.548-2.991.006.03634
COADASNS →+0.622+3.008.002.01933
UCECeEF2 →+0.295+1.584.001.00733
COADp70-S6K_pT389 →-0.230-2.991.048.03632
UCECeIF4E →+0.161+3.013.003<.00132
UCECA-Raf_pS299 →-0.080-1.125.009.02932
Each partner links to its Q-omics profile. Showing the 6 strongest of 59 associations by consensus.

ATM by FYCO1 expression — COAD

Box plot of ATM in FYCO1-low vs FYCO1-high samples in COAD.

Explore this box plot interactively →

Exploration