FUOM

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FUOM protein abundance is significantly associated with the RNA expression of many other genes, with 3,567 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible FUOM-associated genes across cancer lineages are LCP2, RSKR, and SEC23B. Each is linked with FUOM in more than 2 cancer types. Because this analysis shows association rather than direction, both FUOM-to-partner and partner-to-FUOM results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FUOM versus LCP2 in LUAD, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FUOM→partner) and Y-score (partner→FUOM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADLCP2 →+0.638+0.442.008.00333
BRCARSKR →-0.418-0.379.001<.00133
LUADSEC23B →-0.524-0.441<.001<.00132
LSCCIDH3B →-0.326-0.269.002.00632
LUADTGFB1 →+0.708+0.500<.001.00232
LUADCD33 →+0.607+0.544.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,567 associations by consensus.

FUOM vs LCP2 — LUAD

Per-sample scatter of FUOM vs LCP2 in LUAD (Pearson r = 0.40).

Explore this scatter interactively →

Exploration