FSD1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FSD1 protein abundance is significantly associated with the RNA expression of many other genes, with 8,517 significant associations in total. GBM shows the largest number of these associations.

The most reproducible FSD1-associated genes across cancer lineages are RAB11FIP1, DIRAS1, and BEGAIN. Each is linked with FSD1 in more than 2 cancer types. Because this analysis shows association rather than direction, both FSD1-to-partner and partner-to-FSD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FSD1 versus RAB11FIP1 in BRCA, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FSD1→partner) and Y-score (partner→FSD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCARAB11FIP1 →-1.516-1.047.008.00633
LSCCDIRAS1 →+1.805+0.845<.001<.00133
GBMBEGAIN →+0.621+0.421.001<.00133
LSCCTMEM121 →+1.049+0.794.002<.00133
GBMMYT1 →+1.415+0.402<.001<.00133
GBMDEPDC1P1 →+0.573+0.329<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,517 associations by consensus.

FSD1 vs RAB11FIP1 — BRCA

Per-sample scatter of FSD1 vs RAB11FIP1 in BRCA (Pearson r = -0.38).

Explore this scatter interactively →

Exploration