FRMD3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FRMD3 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,178 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible FRMD3-associated GO terms across cancer lineages are Negative regulation of endoplasmic reticulum unfolded protein response, Renal water transport, and Cytoplasmic translation. Each is linked with FRMD3 in more than 7 cancer types. Because this analysis shows association rather than direction, both FRMD3-to-partner and partner-to-FRMD3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of endoplasmic reticulum unfolded protein response grouped by FRMD3-low versus FRMD3-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FRMD3→partner) and Y-score (partner→FRMD3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHNegative regulation of endoplasmic reticulum unfolded protein response →+0.077+1.355.002.00128
LUNG_SCLCRenal water transport →-0.786-1.573.009.00136
BREASTCytoplasmic translation →+0.077+0.902<.001<.00136
BREASTNegative regulation of syncytium formation by plasma membrane fusion →+0.094+0.979<.001<.00136
UPPER_AERODIGESTIVE_TRACTGolgi to endosome transport →+0.068+0.950<.001.00136
SOFT_TISSUEAlternative mRNA splicing, via spliceosome →+0.076+1.069<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,178 associations by consensus.

Negative regulation of endoplasmic reticulum unfolded protein response by FRMD3 expression — STOMACH

Box plot of Negative regulation of endoplasmic reticulum unfolded protein response in FRMD3-low vs FRMD3-high samples in STOMACH.

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Exploration