FOXM1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FOXM1 mutation is significantly associated with the total protein of many other genes, with 36 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FOXM1-associated genes across cancer lineages are Cyclin-E2, Bcl-2, and EGFR_pY1173. Each is linked with FOXM1 in more than 2 cancer types. Because this analysis shows association rather than direction, both FOXM1-to-partner and partner-to-FOXM1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cyclin-E2 grouped by FOXM1-low versus FOXM1-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXM1→partner) and Y-score (partner→FOXM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCACyclin-E2 →+0.200+2.845.035.03333
UCECBcl-2 →-0.314-2.095.013.01733
UCECEGFR_pY1173 →+0.072+2.321.013.03332
UCECeIF4G →+0.224+1.807.049.02532
UCECFOXO3a_pS318_S321 →-0.108-2.690.018.00632
UCECp38-MAPK →-0.145-1.979.016.03032
Each partner links to its Q-omics profile. Showing the 6 strongest of 36 associations by consensus.

Cyclin-E2 by FOXM1 expression — BLCA

Box plot of Cyclin-E2 in FOXM1-low vs FOXM1-high samples in BLCA.

Explore this box plot interactively →

Exploration