FOXL2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FOXL2 mutation is significantly associated with the RNA expression of many other genes, with 14 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible FOXL2-associated genes across cancer lineages are S100A7A, IFNL3, and KRTAP7-1. Each is linked with FOXL2 in more than 1 cancer types. Because this analysis shows association rather than direction, both FOXL2-to-partner and partner-to-FOXL2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXL2→partner) and Y-score (partner→FOXL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaS100A7A →+0.056+5.643<.001.00231
BLOOD_LymphomaIFNL3 →+0.100+5.209.001.00531
BLOOD_LymphomaKRTAP7-1 →+0.031+4.867<.001.00931
BLOOD_LeukemiaC20orf85 →+0.052+6.554<.001<.00131
BLOOD_LeukemiaIL22 →+0.037+5.569<.001.00131
BLOOD_LeukemiaART1 →+0.022+4.705<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 14 associations by consensus.

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