FOXF2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FOXF2 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,524 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible FOXF2-associated proteins across cancer lineages are HMCN1, SGCD, and SNX18. Each is linked with FOXF2 in more than 5 cancer types. Because this analysis shows association rather than direction, both FOXF2-to-partner and partner-to-FOXF2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FOXF2 versus HMCN1 in BRCA, with a Pearson correlation of 0.64.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXF2→partner) and Y-score (partner→FOXF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAHMCN1 →+0.854+0.841<.001<.00136
OVSGCD →+0.729+0.701<.001<.00135
OVSNX18 →+0.365+0.537.004<.00135
BRCACOL5A2 →+0.838+0.845<.001<.00135
BRCAITIH5 →+0.629+0.583<.001<.00135
BRCAPDLIM1 →+0.344+0.554.003<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,524 associations by consensus.

FOXF2 vs HMCN1 — BRCA

Per-sample scatter of FOXF2 vs HMCN1 in BRCA (Pearson r = 0.64).

Explore this scatter interactively →

Exploration