FOXE1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FOXE1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,982 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FOXE1-associated proteins across cancer lineages are MAP1B_T1788, THOC2, and TMEM41A. Each is linked with FOXE1 in more than 2 cancer types. Because this analysis shows association rather than direction, both FOXE1-to-partner and partner-to-FOXE1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FOXE1 versus MAP1B_T1788 in LSCC, with a Pearson correlation of 0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXE1→partner) and Y-score (partner→FOXE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMAP1B_T1788 →+1.110+1.425<.001<.00133
HNSCTHOC2 →+0.259+1.269.001.00333
HNSCTMEM41A →+0.500+1.528<.001<.00133
LSCCTRIAP1 →-0.299-1.951<.001<.00133
LSCCPOLR2H →+0.370+1.884<.001.00133
HNSCPRKDC_S4026 →+0.481+1.775<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,982 associations by consensus.

FOXE1 vs MAP1B_T1788 — LSCC

Per-sample scatter of FOXE1 vs MAP1B_T1788 in LSCC (Pearson r = 0.45).

Explore this scatter interactively →

Exploration