FOXE1

Across TCGA cell cohorts, FOXE1 RNA expression is significantly associated with the RNA expression of many other genes, with 5,598 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible FOXE1-associated genes across cancer lineages are USH1G, JAG2, and EFS. Each is linked with FOXE1 in more than 4 cancer types. Because this analysis shows association rather than direction, both FOXE1-to-partner and partner-to-FOXE1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FOXE1 versus USH1G in UPPER_AERODIGESTIVE_TRACT, with a Pearson correlation of 0.62.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXE1→partner) and Y-score (partner→FOXE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	USH1G →	+1.389	+1.916	<.001	.001	3	4
OESOPHAGUS	JAG2 →	+2.508	+3.131	<.001	<.001	3	4
OESOPHAGUS	EFS →	+2.684	+2.265	<.001	<.001	3	4
OESOPHAGUS	FBLN1 →	+4.128	+2.475	<.001	<.001	3	4
OESOPHAGUS	DSC3 →	+4.548	+3.513	<.001	<.001	3	4
OESOPHAGUS	BRF1 →	+0.866	+2.223	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,598 associations by consensus.

FOXE1 vs USH1G — UPPER_AERODIGESTIVE_TRACT

Explore this scatter interactively →