FOXC1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FOXC1 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,124 significant associations in total. BONE shows the largest number of these associations.

The most reproducible FOXC1-associated GO terms across cancer lineages are Regulation of lymphangiogenesis, Mesenchymal cell development, and Regulation of actin filament length. Each is linked with FOXC1 in more than 14 cancer types. Because this analysis shows association rather than direction, both FOXC1-to-partner and partner-to-FOXC1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of lymphangiogenesis grouped by FOXC1-low versus FOXC1-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXC1→partner) and Y-score (partner→FOXC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHRegulation of lymphangiogenesis →+1.609+2.799<.001<.001315
KIDNEYMesenchymal cell development →+1.454+1.187<.001.008211
PANCREASRegulation of actin filament length →+0.096+1.491<.001<.00138
URINARY_TRACTNegative regulation of transforming growth factor beta production →+0.312+2.128<.001<.00138
PANCREASRegulation of actin polymerization or depolymerization →+0.097+1.393<.001<.00138
BONESchwann cell differentiation →+0.119+1.570<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,124 associations by consensus.

Regulation of lymphangiogenesis by FOXC1 expression — STOMACH

Box plot of Regulation of lymphangiogenesis in FOXC1-low vs FOXC1-high samples in STOMACH.

Explore this box plot interactively →

Exploration