FOXA3

Across TCGA cell cohorts, FOXA3 RNA expression is significantly associated with the RNA expression of many other genes, with 6,518 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible FOXA3-associated genes across cancer lineages are GAL3ST1, HNF1A, and STARD10. Each is linked with FOXA3 in more than 6 cancer types. Because this analysis shows association rather than direction, both FOXA3-to-partner and partner-to-FOXA3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FOXA3 versus GAL3ST1 in LIVER, with a Pearson correlation of 0.72.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXA3→partner) and Y-score (partner→FOXA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIVER	GAL3ST1 →	+2.206	+3.527	.001	<.001	3	7
LIVER	HNF1A →	+3.855	+2.988	<.001	<.001	3	6
LIVER	STARD10 →	+1.932	+2.597	<.001	<.001	3	5
STOMACH	SMIM6 →	+2.153	+3.340	<.001	<.001	3	5
STOMACH	MUC13 →	+3.940	+2.854	<.001	<.001	3	5
STOMACH	SH3BGRL2 →	+2.617	+2.676	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,518 associations by consensus.

FOXA3 vs GAL3ST1 — LIVER

Explore this scatter interactively →