FNTB

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FNTB RNA expression is significantly associated with the go_rna of many other GO terms, with 3,817 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible FNTB-associated GO terms across cancer lineages are Protein farnesylation, Positive regulation of lymphoid progenitor cell differentiation, and Endosomal transport. Each is linked with FNTB in more than 18 cancer types. Because this analysis shows association rather than direction, both FNTB-to-partner and partner-to-FNTB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein farnesylation grouped by FNTB-low versus FNTB-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FNTB→partner) and Y-score (partner→FNTB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINProtein farnesylation →+0.216+1.471<.001<.001319
LUNG_SCLCPositive regulation of lymphoid progenitor cell differentiation →+0.101+0.479<.001<.001313
STOMACHEndosomal transport →+0.061+0.604.003.004313
PANCREASPositive regulation of mRNA metabolic process →+0.065+0.797<.001<.001312
LARGE_INTESTINERegulation of intracellular estrogen receptor signaling pathway →+0.082+0.457<.001<.001312
LARGE_INTESTINEmRNA alternative polyadenylation →+0.075+0.787<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,817 associations by consensus.

Protein farnesylation by FNTB expression — SKIN

Box plot of Protein farnesylation in FNTB-low vs FNTB-high samples in SKIN.

Explore this box plot interactively →

Exploration