FNTA

Across TCGA patient cohorts, FNTA RNA expression is significantly associated with the protein abundance of many other proteins, with 9,464 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FNTA-associated proteins across cancer lineages are POLB, NSD3, and IKBKB. Each is linked with FNTA in more than 6 cancer types. Because this analysis shows association rather than direction, both FNTA-to-partner and partner-to-FNTA results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FNTA versus POLB in LSCC, with a Pearson correlation of 0.65.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FNTA→partner) and Y-score (partner→FNTA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	POLB →	+0.515	+0.492	<.001	<.001	3	7
LSCC	NSD3 →	+0.580	+0.582	<.001	<.001	3	6
LSCC	IKBKB →	+0.328	+0.552	<.001	.002	3	5
LSCC	ASH2L →	+0.362	+0.478	<.001	<.001	3	5
BRCA	HOOK3 →	+0.399	+0.593	<.001	<.001	3	5
HNSC	ZFR →	+0.188	+0.671	.004	.003	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,464 associations by consensus.

FNTA vs POLB — LSCC

Explore this scatter interactively →