FNTA

Across TCGA cell cohorts, FNTA RNA expression is significantly associated with the go_rna of many other GO terms, with 2,200 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible FNTA-associated GO terms across cancer lineages are Interkinetic nuclear migration, Skeletal muscle acetylcholine-gated channel clustering, and Regulation of telomere capping. Each is linked with FNTA in more than 12 cancer types. Because this analysis shows association rather than direction, both FNTA-to-partner and partner-to-FNTA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Interkinetic nuclear migration grouped by FNTA-low versus FNTA-high in BREAST.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FNTA→partner) and Y-score (partner→FNTA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	Interkinetic nuclear migration →	+0.121	+1.068	<.001	<.001	3	13
PANCREAS	Skeletal muscle acetylcholine-gated channel clustering →	+0.192	+0.656	.002	.002	3	9
SOFT_TISSUE	Regulation of telomere capping →	+0.086	+0.535	<.001	<.001	3	8
SKIN	Negative regulation of maintenance of sister chromatid cohesion →	+0.106	+0.508	<.001	<.001	3	8
SKIN	Negative regulation of maintenance of mitotic sister chromatid cohesion →	+0.106	+0.508	<.001	<.001	3	8
CNS	Microtubule anchoring at microtubule organizing center →	+0.064	+0.460	.002	.003	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,200 associations by consensus.

Interkinetic nuclear migration by FNTA expression — BREAST

Explore this box plot interactively →