FNDC7

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FNDC7 mutation is significantly associated with the RNA expression of many other genes, with 411 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible FNDC7-associated genes across cancer lineages are OR4B1, OR12D3, and TAAR8. Each is linked with FNDC7 in more than 1 cancer types. Because this analysis shows association rather than direction, both FNDC7-to-partner and partner-to-FNDC7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR4B1 grouped by FNDC7-low versus FNDC7-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FNDC7→partner) and Y-score (partner→FNDC7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCOR4B1 →+0.055+5.029<.001.00631
LUNG_NSCLC_LUADOR12D3 →+0.035+5.228<.001.00531
LUNG_NSCLC_LUADTAAR8 →+0.022+5.662<.001.00231
LUNG_NSCLC_LUADOR56A5 →+0.111+4.887<.001.00931
LUNG_NSCLC_LUADIQCF3 →+0.045+5.228<.001.00531
LUNG_NSCLC_LUADOR12D1 →+0.042+4.887<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 411 associations by consensus.

OR4B1 by FNDC7 expression — LUNG_SCLC

Box plot of OR4B1 in FNDC7-low vs FNDC7-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration