FNDC11

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FNDC11 mutation is significantly associated with the immune_cell of many other genes, with 6 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FNDC11-associated genes across cancer lineages are Platelets, aDC, and CD8+ T-cells. Each is linked with FNDC11 in more than 1 cancer types. Because this analysis shows association rather than direction, both FNDC11-to-partner and partner-to-FNDC11 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Platelets grouped by FNDC11-low versus FNDC11-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FNDC11→partner) and Y-score (partner→FNDC11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCPlatelets →+0.030+4.121<.001.02832
UCECaDC →+0.103+3.008.005.01931
UCECCD8+ T-cells →+0.023+2.845<.001.00531
UCECCD8+ Tcm →+0.021+2.350.030.03131
UCECCD8+ Tem →+0.003+4.606<.001.04431
UCECCD4+ naive T-cells →+0.017+3.267<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

Platelets by FNDC11 expression — CESC

Box plot of Platelets in FNDC11-low vs FNDC11-high samples in CESC.

Explore this box plot interactively →

Exploration