FNDC1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FNDC1 protein abundance is significantly associated with the RNA expression of many other genes, with 9,315 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible FNDC1-associated genes across cancer lineages are MYL9, ADAM12, and MEIS3. Each is linked with FNDC1 in more than 8 cancer types. Because this analysis shows association rather than direction, both FNDC1-to-partner and partner-to-FNDC1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FNDC1 versus MYL9 in CCRCC, with a Pearson correlation of 0.64.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FNDC1→partner) and Y-score (partner→FNDC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCMYL9 →+1.416+2.049<.001<.00139
BRCAADAM12 →+1.468+0.842<.001<.00139
BRCAMEIS3 →+1.024+0.535<.001<.00138
COADSFRP4 →+2.386+0.703<.001<.00138
BRCASPARC →+1.461+0.926<.001<.00138
OVISLR →+1.249+0.593<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,315 associations by consensus.

FNDC1 vs MYL9 — CCRCC

Per-sample scatter of FNDC1 vs MYL9 in CCRCC (Pearson r = 0.64).

Explore this scatter interactively →

Exploration