FMO4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FMO4 protein abundance is significantly associated with the RNA expression of many other genes, with 3,517 significant associations in total. GBM shows the largest number of these associations.

The most reproducible FMO4-associated genes across cancer lineages are POLH-AS1, NEFM, and RAB14. Each is linked with FMO4 in more than 2 cancer types. Because this analysis shows association rather than direction, both FMO4-to-partner and partner-to-FMO4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FMO4 versus POLH-AS1 in UCEC, with a Pearson correlation of -0.54.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FMO4→partner) and Y-score (partner→FMO4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPOLH-AS1 →-1.437-0.610.006.00933
UCECNEFM →-1.920-0.908.002.00523
UCECRAB14 →-0.418-0.964.004.00132
GBMMAP4K5 →-0.581-0.555.001<.00132
UCECNUSAP1 →-0.500-0.616.004.00232
UCECABI2 →-0.750-0.686<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,517 associations by consensus.

FMO4 vs POLH-AS1 — UCEC

Per-sample scatter of FMO4 vs POLH-AS1 in UCEC (Pearson r = -0.54).

Explore this scatter interactively →

Exploration