FLVCR2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FLVCR2 mutation is significantly associated with the RNA expression of many other genes, with 4,134 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FLVCR2-associated genes across cancer lineages are CCDC3, ABLIM2, and GPER1. Each is linked with FLVCR2 in more than 1 cancer types. Because this analysis shows association rather than direction, both FLVCR2-to-partner and partner-to-FLVCR2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCDC3 grouped by FLVCR2-low versus FLVCR2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FLVCR2→partner) and Y-score (partner→FLVCR2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCCDC3 →-0.673-2.584.004.00132
UCECABLIM2 →-0.419-1.716.005.00432
UCECGPER1 →-0.619-2.415.003.00332
UCECDYNLRB2 →-0.843-2.689.004.00532
UCECLRRC34 →-0.451-1.989.004.00132
UCECEFCAB1 →-1.078-3.796.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,134 associations by consensus.

CCDC3 by FLVCR2 expression — UCEC

Box plot of CCDC3 in FLVCR2-low vs FLVCR2-high samples in UCEC.

Explore this box plot interactively →

Exploration