FLT4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FLT4 protein abundance is significantly associated with the RNA expression of many other genes, with 10,673 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible FLT4-associated genes across cancer lineages are DENND1B, LYVE1, and KCNJ15. Each is linked with FLT4 in more than 2 cancer types. Because this analysis shows association rather than direction, both FLT4-to-partner and partner-to-FLT4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FLT4 versus DENND1B in CCRCC, with a Pearson correlation of -0.31.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FLT4→partner) and Y-score (partner→FLT4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCDENND1B →-0.472-0.490<.001<.00133
GBMLYVE1 →+1.346+0.683<.001<.00133
CCRCCKCNJ15 →+1.081+0.337.001.00433
CCRCCVWA1 →+0.833+0.555<.001<.00133
GBMC3orf86 →+0.379+0.720<.001<.00133
LSCCFLT1P1 →+0.331+0.337<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,673 associations by consensus.

FLT4 vs DENND1B — CCRCC

Per-sample scatter of FLT4 vs DENND1B in CCRCC (Pearson r = -0.31).

Explore this scatter interactively →

Exploration