FLT4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FLT4 mutation is significantly associated with the RNA expression of many other genes, with 7,435 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FLT4-associated genes across cancer lineages are MND1, NUDT15, and SGO2. Each is linked with FLT4 in more than 5 cancer types. Because this analysis shows association rather than direction, both FLT4-to-partner and partner-to-FLT4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MND1 grouped by FLT4-low versus FLT4-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FLT4→partner) and Y-score (partner→FLT4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADMND1 →+0.991+3.193<.001.00936
UCECNUDT15 →+0.436+2.021<.001<.00136
SKCMSGO2 →+0.508+1.634.004<.00136
UCECWDR76 →+0.667+1.847<.001<.00135
LUADE2F2 →+0.830+3.596<.001.00135
UCECMYO19 →+0.432+1.662<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,435 associations by consensus.

MND1 by FLT4 expression — LUAD

Box plot of MND1 in FLT4-low vs FLT4-high samples in LUAD.

Explore this box plot interactively →

Exploration