FLT4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FLT4 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,910 significant associations in total. BONE shows the largest number of these associations.

The most reproducible FLT4-associated GO terms across cancer lineages are Protein-RNA complex assembly, Heterochromatin formation, and Transcription initiation at RNA polymerase II promoter. Each is linked with FLT4 in more than 9 cancer types. Because this analysis shows association rather than direction, both FLT4-to-partner and partner-to-FLT4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein-RNA complex assembly grouped by FLT4-low versus FLT4-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FLT4→partner) and Y-score (partner→FLT4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEProtein-RNA complex assembly →+0.087+1.964<.001<.001310
BONEHeterochromatin formation →+0.074+1.729.002<.001310
BONETranscription initiation at RNA polymerase II promoter →+0.082+2.129<.001<.001310
BONERegulation of monoatomic ion transmembrane transport →-0.099-2.432<.001<.001310
BONEEpigenetic regulation of gene expression →+0.051+1.573.003<.00139
BONENegative regulation of gene expression, epigenetic →+0.085+1.742.004.00339
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,910 associations by consensus.

Protein-RNA complex assembly by FLT4 expression — BONE

Box plot of Protein-RNA complex assembly in FLT4-low vs FLT4-high samples in BONE.

Explore this box plot interactively →

Exploration