FIG4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FIG4 mutation is significantly associated with the total protein of many other genes, with 25 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FIG4-associated genes across cancer lineages are PCNA, FASN, and eIF4E. Each is linked with FIG4 in more than 2 cancer types. Because this analysis shows association rather than direction, both FIG4-to-partner and partner-to-FIG4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PCNA grouped by FIG4-low versus FIG4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FIG4→partner) and Y-score (partner→FIG4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPCNA →+0.174+2.459.020.01833
COADFASN →+0.591+2.815.005.03632
UCECeIF4E →+0.204+3.598.005.00132
UCECFoxM1 →+0.199+2.070.026.00132
UCECp27_pT198 →+0.075+1.440.043.02432
UCECTFRC →+0.379+1.874.039.04932
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

PCNA by FIG4 expression — UCEC

Box plot of PCNA in FIG4-low vs FIG4-high samples in UCEC.

Explore this box plot interactively →

Exploration