FIBIN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FIBIN protein abundance is significantly associated with the RNA expression of many other genes, with 7,720 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FIBIN-associated genes across cancer lineages are TNFAIP6, MEDAG, and CRISPLD2. Each is linked with FIBIN in more than 4 cancer types. Because this analysis shows association rather than direction, both FIBIN-to-partner and partner-to-FIBIN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FIBIN versus TNFAIP6 in LSCC, with a Pearson correlation of 0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FIBIN→partner) and Y-score (partner→FIBIN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCTNFAIP6 →+1.337+0.738<.001<.00135
LUADMEDAG →+0.869+0.296<.001.00234
BRCACRISPLD2 →+1.016+0.682<.001<.00134
LSCCPDGFRL →+1.105+0.667<.001<.00134
GBMPCOLCE →+1.200+0.409.001.00334
BRCARARRES2 →+1.104+0.622<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,720 associations by consensus.

FIBIN vs TNFAIP6 — LSCC

Per-sample scatter of FIBIN vs TNFAIP6 in LSCC (Pearson r = 0.46).

Explore this scatter interactively →

Exploration