FH

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, FH RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of FH’s most consistent transcriptional readouts.

The strongest signal is observed in lung adenocarcinoma (LUAD), where FH RNA is more highly expressed in tumor relative to normal tissue. In most cancer types FH is over-expressed in tumor, although a few such as THCA and KIRC show the opposite, repressed pattern.

LUAD, THCA, and KIRC are the cancer types where FH tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in FH RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUADMaleAll+0.661<.00111view →
THCAMaleIII,IV−0.885<.00110view →
KIRCMaleII,III,IV−0.816<.0019view →
LIHCMaleAll+0.672<.0019view →
LUSCMaleII,III,IV+0.724<.0018view →
UCECAllAll+0.703<.0016view →
BRCAAllII,III,IV+0.588<.0016view →
KIRPAllAll−0.429.0072view →
COADMaleAll−0.256.0142view →
BLCAFemaleIII,IV+0.411.0111view →
STADAllII,III,IV+0.258.0251view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

FH–LUAD

Tumor-vs-normal expression box plot for FH RNA in LUAD.

Open the LUAD breakdown →

Exploration