FGD4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FGD4 mutation is significantly associated with the total protein of many other genes, with 31 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FGD4-associated genes across cancer lineages are TFRC, MEK1, and c-Kit. Each is linked with FGD4 in more than 2 cancer types. Because this analysis shows association rather than direction, both FGD4-to-partner and partner-to-FGD4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TFRC grouped by FGD4-low versus FGD4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FGD4→partner) and Y-score (partner→FGD4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTFRC →+0.371+2.459.034.01833
UCECMEK1 →+0.336+3.000.005<.00132
UCECc-Kit →-0.158-2.102.040.01632
UCECCyclin-B1 →+0.512+1.652.005.00632
UCECEGFR →-0.186-2.321<.001.00531
UCECeIF4E →+0.147+1.652.033.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

TFRC by FGD4 expression — UCEC

Box plot of TFRC in FGD4-low vs FGD4-high samples in UCEC.

Explore this box plot interactively →

Exploration