FERMT3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FERMT3 mutation is significantly associated with the RNA expression of many other genes, with 806 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible FERMT3-associated genes across cancer lineages are FBXW10, ADAM7, and POLDIP3. Each is linked with FERMT3 in more than 1 cancer types. Because this analysis shows association rather than direction, both FERMT3-to-partner and partner-to-FERMT3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FBXW10 grouped by FERMT3-low versus FERMT3-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FERMT3→partner) and Y-score (partner→FERMT3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEFBXW10 →+0.239+3.906<.001<.00132
LARGE_INTESTINEADAM7 →+0.003+2.538<.001.00532
LARGE_INTESTINEPOLDIP3 →+0.570+3.192.004.00731
LARGE_INTESTINERPL3 →+0.459+3.237.009.00331
LARGE_INTESTINEMTMR3 →+0.631+3.364.006.00231
LARGE_INTESTINESAMM50 →+0.600+3.234<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 806 associations by consensus.

FBXW10 by FERMT3 expression — LARGE_INTESTINE

Box plot of FBXW10 in FERMT3-low vs FERMT3-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration