FCHSD2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FCHSD2 protein abundance is significantly associated with the RNA expression of many other genes, with 13,920 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FCHSD2-associated genes across cancer lineages are CSF2RB, CYTH4, and EBI3. Each is linked with FCHSD2 in more than 7 cancer types. Because this analysis shows association rather than direction, both FCHSD2-to-partner and partner-to-FCHSD2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FCHSD2 versus CSF2RB in BRCA, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FCHSD2→partner) and Y-score (partner→FCHSD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACSF2RB →+1.018+0.237<.001<.00138
HNSCCYTH4 →+0.838+0.299.002<.00137
UCECEBI3 →+0.721+0.179<.001<.00137
LSCCP2RY8 →+0.923+0.317<.001<.00137
HNSCGIMAP1 →+0.589+0.232<.001.00137
BRCALTB →+1.461+0.198<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,920 associations by consensus.

FCHSD2 vs CSF2RB — BRCA

Per-sample scatter of FCHSD2 vs CSF2RB in BRCA (Pearson r = 0.38).

Explore this scatter interactively →

Exploration