FBXW2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FBXW2 mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible FBXW2-associated genes across cancer lineages are OR1N2, CNTN6, and FATE1. Each is linked with FBXW2 in more than 1 cancer types. Because this analysis shows association rather than direction, both FBXW2-to-partner and partner-to-FBXW2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR1N2 grouped by FBXW2-low versus FBXW2-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FBXW2→partner) and Y-score (partner→FBXW2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCOR1N2 →+0.025+5.029<.001.00631
BLOOD_LeukemiaCNTN6 →+0.216+3.855<.001.00731
BLOOD_LeukemiaFATE1 →+0.106+3.551<.001.00931
BLOOD_LeukemiaKCNJ3 →+0.627+3.722<.001.00931
BLOOD_LeukemiaWFDC12 →+0.198+3.874<.001.00531
BLOOD_LeukemiaDEFB4A →+0.096+4.269.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

OR1N2 by FBXW2 expression — LUNG_SCLC

Box plot of OR1N2 in FBXW2-low vs FBXW2-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration