Across TCGA pan-cancer cohorts, FBXL3 mass-spec protein differs between tumor and matched normal tissue in 3 of 18 cancer types tested, making tumor–normal expression one of FBXL3’s most consistent transcriptional readouts.
The strongest signal is observed in lung squamous cell carcinoma (LSCC), where FBXL3 mass-spec protein is repressed in tumor relative to normal tissue. In most cancer types FBXL3 is over-expressed in tumor, although a few such as LSCC and LUAD show the opposite, repressed pattern.
LSCC, LUAD, and PDAC are the cancer types where FBXL3 tumor–normal differential expression is most reproducible.