FASTKD1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FASTKD1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,428 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible FASTKD1-associated GO terms across cancer lineages are Mitochondrial RNA processing, Mitochondrial RNA metabolic process, and Mitochondrial gene expression. Each is linked with FASTKD1 in more than 16 cancer types. Because this analysis shows association rather than direction, both FASTKD1-to-partner and partner-to-FASTKD1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mitochondrial RNA processing grouped by FASTKD1-low versus FASTKD1-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FASTKD1→partner) and Y-score (partner→FASTKD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCMitochondrial RNA processing →+0.112+1.123<.001<.001317
BONEMitochondrial RNA metabolic process →+0.106+0.702<.001.001316
BONEMitochondrial gene expression →+0.097+0.628<.001.005315
BONEMitochondrial tRNA modification →+0.141+0.713<.001.001315
BONEMitochondrial RNA modification →+0.133+0.713<.001.002314
BONEMitochondrial tRNA processing →+0.125+0.649<.001.003313
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,428 associations by consensus.

Mitochondrial RNA processing by FASTKD1 expression — LUNG_SCLC

Box plot of Mitochondrial RNA processing in FASTKD1-low vs FASTKD1-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration