FARP1

Across TCGA patient cohorts, FARP1 protein abundance is significantly associated with the RNA expression of many other genes, with 14,935 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible FARP1-associated genes across cancer lineages are PRICKLE2, CAB39L, and CLN5. Each is linked with FARP1 in more than 7 cancer types. Because this analysis shows association rather than direction, both FARP1-to-partner and partner-to-FARP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FARP1 versus PRICKLE2 in BRCA, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FARP1→partner) and Y-score (partner→FARP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	PRICKLE2 →	+0.638	+0.305	<.001	<.001	3	8
COAD	CAB39L →	+1.249	+0.314	<.001	<.001	3	7
OV	CLN5 →	+0.561	+0.519	<.001	<.001	3	7
CCRCC	MICU3 →	+0.724	+0.362	<.001	<.001	3	7
UCEC	VSTM4 →	+0.812	+0.277	<.001	.002	3	7
BRCA	NAXD →	+0.542	+0.385	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,935 associations by consensus.

FARP1 vs PRICKLE2 — BRCA

Explore this scatter interactively →