FARP1-AS1

Across TCGA patient cohorts, FARP1-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,027 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible FARP1-AS1-associated GO terms across cancer lineages are Negative regulation of RNA splicing, Negative regulation of mRNA processing, and Negative regulation of DNA-templated transcription, elongation. Each is linked with FARP1-AS1 in more than 20 cancer types. Because this analysis shows association rather than direction, both FARP1-AS1-to-partner and partner-to-FARP1-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of RNA splicing grouped by FARP1-AS1-low versus FARP1-AS1-high in KIRP.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FARP1-AS1→partner) and Y-score (partner→FARP1-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIRP	Negative regulation of RNA splicing →	+0.052	+0.394	<.001	<.001	3	21
KIRP	Negative regulation of mRNA processing →	+0.053	+0.404	<.001	<.001	3	20
STAD	Negative regulation of DNA-templated transcription, elongation →	+0.047	+0.274	<.001	<.001	3	19
STAD	Obsolete histone modification →	+0.038	+0.254	<.001	<.001	3	19
STAD	Positive regulation of DNA repair →	+0.037	+0.292	<.001	<.001	3	19
KIRP	Base-excision repair, AP site formation →	+0.067	+0.378	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,027 associations by consensus.

Negative regulation of RNA splicing by FARP1-AS1 expression — KIRP

Explore this box plot interactively →