FAM8A1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM8A1 mutation is significantly associated with the RNA expression of many other genes, with 677 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM8A1-associated genes across cancer lineages are RNU5A-5P, RAB28P1, and SVOPL. Each is linked with FAM8A1 in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM8A1-to-partner and partner-to-FAM8A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU5A-5P grouped by FAM8A1-low versus FAM8A1-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM8A1→partner) and Y-score (partner→FAM8A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADRNU5A-5P →+0.566+5.798<.001.00332
SKCMRAB28P1 →+0.074+7.816<.001.00831
UCECSVOPL →-0.422-3.435.004.00531
UCECC12orf43 →+0.373+3.354.003.00531
UCECSLAMF8 →+0.950+3.338.003.00531
UCECMRPL10 →+0.472+3.595.006.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 677 associations by consensus.

RNU5A-5P by FAM8A1 expression — LUAD

Box plot of RNU5A-5P in FAM8A1-low vs FAM8A1-high samples in LUAD.

Explore this box plot interactively →

Exploration