FAM86B2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM86B2 mutation is significantly associated with the RNA expression of many other genes, with 24 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM86B2-associated genes across cancer lineages are IGKV1OR-2, RNU4-89P, and NPB. Each is linked with FAM86B2 in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM86B2-to-partner and partner-to-FAM86B2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IGKV1OR-2 grouped by FAM86B2-low versus FAM86B2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM86B2→partner) and Y-score (partner→FAM86B2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECIGKV1OR-2 →+0.298+3.130<.001.00331
UCECRNU4-89P →+0.622+3.698.007.00331
UCECNPB →+0.108+4.082<.001.00131
UCECMIR103A1 →+0.257+4.885<.001.00231
UCECRNU6ATAC2P →+0.270+3.344.005.00731
UCECTRBV11-1 →+0.563+3.909<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 24 associations by consensus.

IGKV1OR-2 by FAM86B2 expression — UCEC

Box plot of IGKV1OR-2 in FAM86B2-low vs FAM86B2-high samples in UCEC.

Explore this box plot interactively →

Exploration