FAM71F2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM71F2 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible FAM71F2-associated genes across cancer lineages are MYOD1, KCNA4, and IFNA4. Each is linked with FAM71F2 in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM71F2-to-partner and partner-to-FAM71F2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM71F2→partner) and Y-score (partner→FAM71F2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaMYOD1 →+0.022+4.922<.001.00931
BLOOD_LeukemiaKCNA4 →+0.028+4.922<.001.00931
BLOOD_LeukemiaIFNA4 →+0.058+4.922<.001.00931
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Exploration