FAM71F1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM71F1 protein abundance is significantly associated with the RNA expression of many other genes, with 3,514 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FAM71F1-associated genes across cancer lineages are ADGRG3, CLC, and DNAH8. Each is linked with FAM71F1 in more than 2 cancer types. Because this analysis shows association rather than direction, both FAM71F1-to-partner and partner-to-FAM71F1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM71F1 versus ADGRG3 in LSCC, with a Pearson correlation of 0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM71F1→partner) and Y-score (partner→FAM71F1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCADGRG3 →+0.751+0.628.003.00433
OVCLC →+2.604+2.580<.001.00532
LSCCDNAH8 →+0.328+0.690<.001.00932
OVFANCI →+1.493+2.772.007.00432
LSCCTRIM16L →-1.503-0.722.001.00232
BRCARWDD4P2 →-1.048-2.308<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,514 associations by consensus.

FAM71F1 vs ADGRG3 — LSCC

Per-sample scatter of FAM71F1 vs ADGRG3 in LSCC (Pearson r = 0.35).

Explore this scatter interactively →

Exploration